Index

A

amount (ledsa.analysis.Experiment.Layers attribute)

apply_color_correction() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) average_images (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

B

borders (ledsa.analysis.Experiment.Layers attribute)

bottom_border (ledsa.analysis.Experiment.Layer attribute) (ledsa.analysis.Experiment.Layers attribute)

C

calc_and_set_coefficients() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) (ledsa.analysis.StackedExtinctionCoefficients.StackedExtinctionCoefficients method) calc_and_set_coefficients_mp() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) (ledsa.analysis.StackedExtinctionCoefficients.StackedExtinctionCoefficients method) calc_and_set_ref_intensities() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) calc_coefficients_of_img() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) (ledsa.analysis.ExtinctionCoefficientsLinear.ExtinctionCoefficientsLinear method) (ledsa.analysis.ExtinctionCoefficientsNonLinear.ExtinctionCoefficientsNonLinear method) calc_distance_array() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) calc_intensities() (ledsa.analysis.ExtinctionCoefficientsNonLinear.ExtinctionCoefficientsNonLinear method) calc_traversed_dist_in_plane() (ledsa.analysis.Experiment.Experiment method)

calc_traversed_dist_per_layer() (ledsa.analysis.Experiment.Experiment method) calc_traversed_dist_per_layer_with_nonzero_alpha() (ledsa.analysis.Experiment.Experiment method) calc_traversed_height_in_layer() (ledsa.analysis.Experiment.Experiment method) calculate_coordinates() (in module ledsa.ledpositions.coordinates) Camera (class in ledsa.analysis.Experiment) camera_channels (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) ConfigData (class in ledsa.core.ConfigData) ConfigDataAnalysis (class in ledsa.analysis.ConfigDataAnalysis) ConfigDataStacked (class in ledsa.analysis.ConfigDataStacked) cost_function() (ledsa.analysis.ExtinctionCoefficientsNonLinear.ExtinctionCoefficientsNonLinear method) create_template() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked class method)

D

DataExtractor (class in ledsa.data_extraction.DataExtractor) DEFAULT_FILENAME (ledsa.analysis.ConfigDataStacked.ConfigDataStacked attribute)

distance_calculation_is_consistent() (ledsa.analysis.Experiment.Experiment method) domain_bounds (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

E

Experiment (class in ledsa.analysis.Experiment) ExperimentData (class in ledsa.analysis.ExperimentData)

ExtinctionCoefficients (class in ledsa.analysis.ExtinctionCoefficients) ExtinctionCoefficientsLinear (class in ledsa.analysis.ExtinctionCoefficientsLinear) ExtinctionCoefficientsNonLinear (class in ledsa.analysis.ExtinctionCoefficientsNonLinear)

F

find_search_areas() (ledsa.data_extraction.DataExtractor.DataExtractor method)

G

get() (ledsa.core.ConfigData.ConfigData method) get2dnparray() (ledsa.core.ConfigData.ConfigData method) get_camera_position() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_datetime() (ledsa.core.ConfigData.ConfigData method) get_fit_data_string() (ledsa.data_extraction.LEDAnalysisData.LEDAnalysisData method) get_image_name_from_time() (ledsa.postprocessing.simulation.SimData method) get_led_array_ids() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_led_array_mapping() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_led_ids() (ledsa.analysis.Experiment.Experiment method) get_led_positions() (ledsa.analysis.Experiment.Experiment method)

get_ledparams_at_led_array() (ledsa.postprocessing.simulation.SimData method) get_ledparams_at_led_id() (ledsa.postprocessing.simulation.SimData method) get_list_of_values() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_main_data_string() (ledsa.data_extraction.LEDAnalysisData.LEDAnalysisData method) get_num_simulations() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_pixel_cordinates_of_LED() (ledsa.postprocessing.simulation.SimData method) get_pixel_values_of_led() (ledsa.postprocessing.simulation.SimData method) get_simulation_path() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_simulation_sections() (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) get_start_time() (ledsa.core.ConfigData.ConfigData method)

I

id (ledsa.analysis.Experiment.LED attribute) in_camera_channels() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) in_camera_position() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) in_domain_bounds() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) in_first_img_analysis_id() (ledsa.core.ConfigData.ConfigData method) in_first_img_experiment_id() (ledsa.core.ConfigData.ConfigData method) in_img_dir() (ledsa.core.ConfigData.ConfigData method) in_img_name_string() (ledsa.core.ConfigData.ConfigData method) in_last_img_analysis_id() (ledsa.core.ConfigData.ConfigData method) in_last_img_experiment_id() (ledsa.core.ConfigData.ConfigData method)

in_led_array_edge_coordinates() (ledsa.core.ConfigData.ConfigData method) in_led_array_edge_indices() (ledsa.core.ConfigData.ConfigData method) in_led_array_indices() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) in_max_num_leds() (ledsa.core.ConfigData.ConfigData method) in_num_arrays() (ledsa.core.ConfigData.ConfigData method) in_num_img_overflow() (ledsa.core.ConfigData.ConfigData method) in_num_layers() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) in_ref_img_id() (ledsa.core.ConfigData.ConfigData method) in_time_diff_to_img_time() (ledsa.core.ConfigData.ConfigData method) in_time_ref_img_file() (ledsa.core.ConfigData.ConfigData method) in_time_ref_img_id() (ledsa.core.ConfigData.ConfigData method)

L

lambda_reg (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) Layer (class in ledsa.analysis.Experiment) Layers (class in ledsa.analysis.Experiment) layers (ledsa.analysis.Experiment.Layers attribute) LED (class in ledsa.analysis.Experiment) LEDAnalysisData (class in ledsa.data_extraction.LEDAnalysisData) ledsa.analysis.ConfigDataAnalysis module ledsa.analysis.ConfigDataStacked module ledsa.analysis.Experiment module ledsa.analysis.ExperimentData module ledsa.analysis.ExtinctionCoefficients module ledsa.analysis.ExtinctionCoefficientsLinear module ledsa.analysis.ExtinctionCoefficientsNonLinear module

ledsa.analysis.StackedExtinctionCoefficients module ledsa.core.ConfigData module ledsa.data_extraction.DataExtractor module ledsa.data_extraction.LEDAnalysisData module ledsa.demo.demo_run module ledsa.demo.demo_setup module ledsa.postprocessing.simulation module load() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) (ledsa.core.ConfigData.ConfigData method) load_config_parameters() (ledsa.analysis.ExperimentData.ExperimentData method) load_img_data() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) load_led_array_indices() (ledsa.data_extraction.DataExtractor.DataExtractor method) load_search_areas() (ledsa.data_extraction.DataExtractor.DataExtractor method)

M

match_leds_to_led_arrays() (ledsa.data_extraction.DataExtractor.DataExtractor method) module ledsa.analysis.ConfigDataAnalysis ledsa.analysis.ConfigDataStacked ledsa.analysis.Experiment ledsa.analysis.ExperimentData ledsa.analysis.ExtinctionCoefficients ledsa.analysis.ExtinctionCoefficientsLinear ledsa.analysis.ExtinctionCoefficientsNonLinear ledsa.analysis.StackedExtinctionCoefficients ledsa.core.ConfigData ledsa.data_extraction.DataExtractor ledsa.data_extraction.LEDAnalysisData ledsa.demo.demo_run ledsa.demo.demo_setup ledsa.postprocessing.simulation

multiindex_series_to_nparray() (in module ledsa.analysis.ExtinctionCoefficients)

N

num_cores (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) num_iterations (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

num_layers (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) num_ref_images (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

O

output_path (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

P

plot_led_arrays() (ledsa.data_extraction.DataExtractor.DataExtractor method) plot_search_areas() (ledsa.data_extraction.DataExtractor.DataExtractor method) pos_x (ledsa.analysis.Experiment.Camera attribute) (ledsa.analysis.Experiment.LED attribute) pos_y (ledsa.analysis.Experiment.Camera attribute) (ledsa.analysis.Experiment.LED attribute)

pos_z (ledsa.analysis.Experiment.Camera attribute) (ledsa.analysis.Experiment.LED attribute) process_image_data() (ledsa.data_extraction.DataExtractor.DataExtractor method) process_img_file() (ledsa.data_extraction.DataExtractor.DataExtractor method)

R

read_all() (ledsa.postprocessing.simulation.SimData method) read_led_params() (ledsa.postprocessing.simulation.SimData method) ref_img_indices (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

reference_property (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) remove_duplicate_heights() (ledsa.postprocessing.simulation.SimData method) request_config_parameters() (ledsa.analysis.ExperimentData.ExperimentData method) run_demo() (in module ledsa.demo.demo_run)

S

save() (ledsa.analysis.ConfigDataAnalysis.ConfigDataAnalysis method) (ledsa.analysis.ConfigDataStacked.ConfigDataStacked method) (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) (ledsa.analysis.StackedExtinctionCoefficients.StackedExtinctionCoefficients method) (ledsa.core.ConfigData.ConfigData method) set_all_member_variables() (ledsa.analysis.ExtinctionCoefficients.ExtinctionCoefficients method) set_leds() (ledsa.analysis.Experiment.Experiment method)

set_timeshift() (ledsa.postprocessing.simulation.SimData method) setup_demo() (in module ledsa.demo.demo_setup) setup_restart() (ledsa.data_extraction.DataExtractor.DataExtractor method) setup_step3() (ledsa.data_extraction.DataExtractor.DataExtractor method) SimData (class in ledsa.postprocessing.simulation) solver (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) StackedExtinctionCoefficients (class in ledsa.analysis.StackedExtinctionCoefficients) StackedSimData (class in ledsa.postprocessing.simulation)

T

time_sync_tolerance (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

top_border (ledsa.analysis.Experiment.Layer attribute) (ledsa.analysis.Experiment.Layers attribute)

W

weighting_curvature (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property)

weighting_preference (ledsa.analysis.ConfigDataStacked.ConfigDataStacked property) write_search_areas() (ledsa.data_extraction.DataExtractor.DataExtractor method)